| Dokumenttyp | Erscheinungsjahr | Titel | Autoren | Herausgeber |
|---|
| article | 2024 | Immunomodulation by glucocorticoid-induced leucine zipper in macrophages: enhanced phagocytosis, protection from pyroptosis, and altered mitochondrial function | Legroux, Thierry M.; Schymik, Hanna S.; Gasparoni, Gilles; Mohammadi, Saeed; Walter, Jörn; Libert, Claude; Diesel, Britta; Hoppstädter, Jessica; Kiemer, Alexandra K. | |
| article | 2024 | EpiSegMix: a flexible distribution hidden Markov model with duration modeling for chromatin state discovery | Schmitz, Johanna Elena; Aggarwal, Nihit; Laufer, Lukas; Walter, Jörn; Salhab, Abdulrahman; Rahmann, Sven | |
| article | 2023 | A Monoclonal Human Alveolar Epithelial Cell Line ("Arlo") with Pronounced Barrier Function for Studying Drug Permeability and Viral Infections | Carius, Patrick; Jungmann, Annemarie; Bechtel, Marco; Grißmer, Alexander; Boese, Annette; Gasparoni, Gilles; Salhab, Abdulrahman; Seipelt, Ralf; Urbschat, Klaus; Richter, Clémentine; Meier, Carola; Bojkova, Denisa; Cinatl, Jindrich; Walter, Jörn Erik; Schneider-Daum, Nicole; Lehr, Claus-Michael | |
| article | 2023 | Alterations in the hepatocyte epigenetic landscape in steatosis | Maji, Ranjan Kumar; Czepukojc, Beate; Scherer, Michael; Tierling, Sascha; Cadenas, Cristina; Gianmoena, Kathrin; Gasparoni, Nina; Nordström, Karl; Gasparoni, Gilles; Laggai, Stephan; Yang, Xinyi; Sinha, Anupam; Ebert, Peter; Falk-Paulsen, Maren; Kinkley, Sarah; Hoppstädter, Jessica; Chung, Ho-Ryun; Rosenstiel, Philip; Hengstler, Jan G; Walter, Jörn Erik; Schulz, Marcel H.; Kessler, Sonja M.; Kiemer, Alexandra | |
| article | 2023 | Intra-pituitary follicle-stimulating hormone signaling regulates hepatic lipid metabolism in mice | Qiao, Sen; Alasmi, Samer; Wyatt, Amanda; Wartenberg, Philipp; Wang, Hongmei; Candlish, Michael; Das, Debajyoti; Aoki, Mari; Grünewald, Ramona; Zhou, Ziyue; Tian, Qinghai; Yu, Qiang; Götz, Viktoria; Belkacemi, Anouar; Raza, Ahsan; Ectors, Fabien; Kattler, Kathrin; Gasparoni, Gilles; Walter, Jörn; Lipp, Peter; Mollard, Patrice; Bernard, Daniel J.; Karatayli, Ersin; Karatayli, Senem Ceren; Lammert, Frank; Boehm, Ulrich | |
| article | 2023 | Mutual Regulation of Transcriptomes between Murine Pneumocytes and Fibroblasts Mediates Alveolar Regeneration in Air-Liquid Interface Cultures | Yao, Yiwen; Miethe, Sarah; Kattler, Kathrin; Colakoglu, Betül; Walter, Jörn; Schneider-Daum, Nicole; Herr, Christian; Garn, Holger; Ritzmann, Felix; Bals, Robert; Beisswenger, Christoph | |
| article | 2022 | Transfer of blocker-based qPCR reactions for DNA methylation analysis into a microfluidic LoC system using thermal modeling | Kärcher, Janik; Schulze, Britta; Dörr, Aaron; Tierling, Sascha; Walter, Jörn | |
| article | 2022 | DNA methylation biomarkers in colorectal cancer: Clinical applications for precision medicine | Fatemi, Nayeralsadat; Tierling, Sascha; Es, Hamidreza Aboulkheyr; Varkiani, Maryam; Mojarad, Ehsan Nazemalhosseini; Aghdaei, Hamid Asadzadeh; Walter, Jörn; Totonchi, Mehdi | |
| article | 2022 | Bisulfite profiling of the MGMT promoter and comparison with routine testing in glioblastoma diagnostics | Tierling, Sascha; Jürgens-Wemheuer, Wiebke M.; Leismann, Alea; Becker-Kettern, Julia; Scherer, Michael; Wrede, Arne; Breuskin, David; Urbschat, Steffi; Sippl, Christoph; Oertel, Joachim; Schulz-Schaeffer, Walter J.; Walter, Jörn | |
| article | 2022 | Transcriptional and Epigenetic Consequences of DMSO Treatment on HepaRG Cells | Dubois-Pot-Schneider, Hélène; Aninat, Caroline; Kattler, Kathrin; Fekir, Karim; Jarnouen, Kathleen; Cerec, Virginie; Glaise, Denise; Salhab, Abdulrahman; Gasparoni, Gilles; Takashi, Kubo; Ishida, Seiichi; Walter, Jörn; Corlu, Anne; Walter, Jörn Erik | |
| article | 2022 | Transcriptional and Epigenetic Consequences of DMSO Treatment on HepaRG Cells | Dubois-Pot-Schneider, Hélène; Aninat, Caroline; Kattler, Kathrin; Fekir, Karim; Jarnouen, Kathleen; Cerec, Virginie; Glaise, Denise; Salhab, Abdulrahman; Gasparoni, Gilles; Takashi, Kubo; Ishida, Seiichi; Walter, Jörn; Corlu, Anne; Walter, Jörn Erik | |
| article | 2021 | Dysregulation of cholesterol homeostasis in human lung cancer tissue and tumour-associated macrophages | Hoppstädter, Jessica; Dembek, Anna; Höring, Marcus; Schymik, Hanna S.; Dahlem, Charlotte; Sultan, Afnan; Wirth, Natalie; Al-Fityan, Salma; Diesel, Britta; Gasparoni, Gilles; Walter, Jörn; Helms, Volkhard; Huwer, Hanno; Simon, Martin; Liebisch, Gerhard; Schulz, Marcel H.; Kiemer, Alexandra K. | |
| article | 2021 | Identification of tissue-specific and common methylation quantitative trait loci in healthy individuals using MAGAR | Scherer, Michael; Gasparoni, Gilles; Rahmouni, Souad; Shashkova, Tatiana; Arnoux, Marion; Louis, Edouard; Nostaeva, Arina; Avalos, Diana; Dermitzakis, Emmanouil T.; Aulchenko, Yurii S.; Lengauer, Thomas; Lyons, Paul A.; Georges, Michel; Walter, Jörn | |
| article | 2021 | Epigenetic control of region-specific transcriptional programs in mouse cerebellar and cortical astrocytes | Welle, Anna; Kasakow, Carmen V.; Jungmann, Annemarie M.; Gobbo, Davide; Stopper, Laura; Nordström, Karl; Salhab, Abdulrahman; Gasparoni, Gilles; Scheller, Anja; Kirchhoff, Frank; Walter, Jörn | |
| article | 2020 | Neuronal deficiency of p38α-MAPK ameliorates symptoms and pathology of APP or Tau-transgenic Alzheimer's mouse models | Schnöder, Laura; Gasparoni, Gilles; Nordström, Karl; Schottek, Andrea; Tomic, Inge; Christmann, Anne; Schäfer, Karl H.; Menger, Michael D.; Walter, Jörn; Fassbender, Klaus; Liu, Alex Yang | |
| article | 2019 | Hidden Markov Modelling Reveals Neighborhood Dependence of Dnmt3a and 3b Activity | Luck, Alexander; Giehr, Peter Pascal; Nordstrom, Karl; Walter, Jörn Erik; Wolf, Verena | |
| conferenceObjectPart | 2019 | A Hybrid HMM Approach for the Dynamics of DNA Methylation | Kyriakopoulos, Charalampos; Giehr, Peter Pascal; Lück, Alexander; Walter, Jörn Erik; Wolf, Verena | Češka, Milan; Paoletti, Nicola |
| article | 2019 | The composition of the pulmonary microbiota in sarcoidosis - an observational study | Becker, André; Vella, Giovanna; Galata, Valentina; Rentz, Katharina; Beisswenger, Christoph; Herr, Christian; Walter, Jörn Erik; Tierling, Sascha; Slevogt, Hortense; Keller, Andreas; Bals, Robert | |
| article | 2019 | CRUP : a comprehensive framework to predict condition-specific regulatory units | Ramisch, Anna; Heinrich, Verena; Glaser, Laura V.; Fuchs, Alisa; Yang, Xinyi; Benner, Philipp; Schöpflin, Robert; Li, Na; Kinkley, Sarah; Römer-Hillmann, Anja; Longinotto, John; Heyne, Steffen; Czepukojc, Beate; Kessler, Sonja M.; Kiemer, Alexandra K.; Cadenas, Cristina; Arrigoni, Laura; Gasparoni, Nina; Manke, Thomas; Pap, Thomas; Pospisilik, John A.; Hengstler, Jan; Walter, Jörn; Meijsing, Sebastiaan H.; Chung, Ho-Ryun; Vingron, Martin | |
| article | 2019 | DNA methylation signatures of monozygotic twins clinically discordant for multiple sclerosis | Souren, Nicole Y.; Gerdes, Lisa A; Lutsik, Pavlo; Gasparoni, Gilles; Beltrán, Eduardo; Salhab, Abdulrahman; Kümpfel, Tania; Weichenhan, Dieter; Plass, Christoph; Hohlfeld, Reinhard; Walter, Jörn Erik | |
| article | 2019 | Unique and assay specific features of NOMe-, ATAC- and DNase I-seq data | Nordström, Karl J. V.; Schmidt, Florian; Gasparoni, Nina; Salhab, Abdulrahman; Gasparoni, Gilles; Kattler, Kathrin; Müller, Fabian; Ebert, Peter; Costa, Ivan G.; Pfeifer, Nico; Lengauer, Thomas; Schulz, Marcel H.; Walter, Jörn Erik | |
| article | 2018 | Assessment of stem cell differentiation based on genome-wide expression profiles | Godoy, Patricio; Schmidt-Heck, Wolfgang; Hellwig, Birte; Nell, Patrick; Feuerborn, David; Rahnenführer, Jörg; Kattler, Kathrin; Walter, Jörn Erik; Blüthgen, Nils; Hengstler, Jan G. | |
| article | 2018 | Integrative analysis of single-cell expression data reveals distinct regulatory states in bidirectional promoters | Behjati Ardakani, Fatemeh; Kattler, Kathrin; Nordström, Karl; Gasparoni, Nina; Gasparoni, Gilles; Fuchs, Sarah; Sinha, Anupam; Barann, Matthias; Ebert, Peter; Fischer, Jonas; Hutter, Barbara; Zipprich, Gideon; Imbusch, Charles D.; Felder, Bärbel; Eils, Jürgen; Brors, Benedikt; Lengauer, Thomas; Manke, Thomas; Rosenstiel, Philip; Walter, Jörn Erik; Schulz, Marcel H. | |
| article | 2018 | Epigenomic map of human liver reveals principles of zonated morphogenic and metabolic control | Brosch, Mario; Kattler, Kathrin; Herrmann, Alexander; von Schönfels, Witigo; Nordström, Karl; Seehofer, Daniel; Damm, Georg; Becker, Thomas; Zeissig, Sebastian; Nehring, Sophie; Reichel, Fabian; Moser, Vincent; Thangapandi, Raghavan Veera; Stickel, Felix; Baretton, Gustavo; Röcken, Christoph; Muders, Michael; Matz-Soja, Madlen; Krawczak, Michael; Gasparoni, Gilles; Hartmann, Hella; Dahl, Andreas; Schafmayer, Clemens; Walter, Jörn Erik; Hampe, Jochen | |
| article | 2018 | Epigenetic regulation of Amphiregulin and Epiregulin in colorectal cancer | Bormann, Felix; Stinzing, Sebastian; Tierling, Sascha; Morkel, Markus; Markelova, Maria Rivera; Walter, Jörn Erik; Weichert, Wilko; Roßner, Florian; Kuhn, Natalia; Perner, Juliane; Dietz, Johanna; Ispasanie, Sylvia; Dietel, Manfred; Schäfer, Reinhold; Heinemann, Volker; Sers, Christine | |
| article | 2018 | A comprehensive analysis of 195 DNA methylomes reveals shared and cell-specific features of partially methylated domains | Salhab, Abdulrahman; Nordström, Karl; Gasparoni, Gilles; Kattler, Kathrin; Ebert, Peter; Ramirez, Fidel; Arrigoni, Laura; Müller, Fabian; Polansky, Julia K.; Cadenas, Cristina; Hengstler, Jan G.; Lengauer, Thomas; Manke, Thomas; Walter, Jörn Erik | |
| article | 2018 | Genomic integrity of ground-state pluripotency | Jafari, Narges; Giehr, Pascal; Hesaraki, Mahdi; Baas, Roy; de Graaf, Petra; Timmers, H. T. Marc; Walter, Jörn Erik; Baharvand, Hossein; Totonchi, Mehdi | |
| article | 2018 | The role of TCF3 as potential master regulator in blastemal Wilms tumors | Kehl, Tim; Schneider, Lara; Kattler, Kathrin; Stöckel, Daniel; Wegert, Jenny; Gerstner, Nico; Ludwig, Nicole; Distler, Ute; Tenzer, Stefan; Gessler, Manfred; Walter, Jörn Erik; Keller, Andreas; Graf, Norbert; Meese, Eckart; Lenhof, Hans-Peter | |
| article | 2018 | DNA methylation analysis on purified neurons and glia dissects age and Alzheimer's disease-specific changes in the human cortex | Gasparoni, Gilles; Bultmann, Sebastian; Lutsik, Pavlo; Kraus, Theo F. J.; Sordon, Sabrina; Vlcek, Julia; Dietinger, Vanessa; Steinmaurer, Martina; Haider, Melanie; Mulholland, Christopher B.; Arzberger, Thomas; Roeber, Sigrun; Riemenschneider, Matthias; Kretzschmar, Hans A.; Giese, Armin; Leonhardt, Heinrich; Walter, Jörn Erik | |
| article | 2018 | LAG-3 Inhibitory Receptor Expression Identifies Immunosuppressive Natural Regulatory Plasma Cells | Lino, Andreia C.; Dang, Van Duc; Lampropoulou, Vicky; Welle, Anna; Joedicke, Jara; Pohar, Jelka; Simon, Quentin; Thalmensi, Jessie; Baures, Aurelia; Flühler, Vinciane; Sakwa, Imme; Stervbo, Ulrik; Ries, Stefanie; Jouneau, Luc; Boudinot, Pierre; Tsubata, Takeshi; Adachi, Takahiro; Hutloff, Andreas; Dörner, Thomas; Zimber-Strobl, Ursula; de Vos, Alex F.; Dahlke, Katja; Loh, Gunnar; Korniotis, Sarantis; Goosmann, Christian; Weill, Jean-Claude; Reynaud, Claude-Agnès; Kaufmann, Stefan H. E.; Walter, Jörn Erik; Fillatreau, Simon | |
| article | 2018 | Two are better than one: HPoxBS - hairpin oxidative bisulfite sequencing | Giehr, Peter Pascal; Kyriakopoulos, Charalampos; Lepikhov, Konstantin; Wallner, Stefan; Wolf, Verena; Walter, Jörn Erik | |
| article | 2018 | Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development | Pan, Wei-Hung; Sommer, Felix; Falk-Paulsen, Maren; Ulas, Thomas; Best, Philipp; Fazio, Antonella; Kachroo, Priyadarshini; Luzius, Anne; Jentzsch, Marlene; Rehman, Ateequr; Müller, Fabian; Lengauer, Thomas; Walter, Jörn Erik; Künzel, Sven; Baines, John F.; Schreiber, Stefan; Franke, Andre; Schultze, Joachim L.; Bäckhed, Fredrik; Rosenstiel, Philip | |
| article | 2018 | Peptide-specific recognition of human cytomegalovirus strains controls adaptive natural killer cells | Hammer, Quirin; Rückert, Timo; Borst, Eva Maria; Dunst, Josefine; Haubner, André; Durek, Pawel; Heinrich, Frederik; Gasparoni, Gilles; Babic, Marina; Tomic, Adriana; Pietra, Gabriella; Nienen, Mikalai; Blau, Igor Wolfgang; Hofmann, Jörg; Na, Il-Kang; Prinz, Immo; Koenecke, Christian; Hemmati, Philipp; Babel, Nina; Arnold, Renate; Walter, Jörn Erik; Thurley, Kevin; Mashreghi, Mir-Farzin; Messerle, Martin; Romagnani, Chiara | |
| article | 2018 | CD137+CD154- Expression As a Regulatory T Cell (Treg)-Specific Activation Signature for Identification and Sorting of Stable Human Tregs from In Vitro Expansion Cultures | Nowak, Anna; Lock, Dominik; Bacher, Petra; Hohnstein, Thordis; Vogt, Katrin; Gottfreund, Judith; Giehr, Pascal; Polansky, Julia K.; Sawitzki, Birgit; Kaiser, Andrew; Walter, Jörn Erik; Scheffold, Alexander | |
| article | 2018 | DNA methylation alterations in iPSC- and hESC-derived neurons : potential implications for neurological disease modeling | de Boni, Laura; Gasparoni, Gilles; Haubenreich, Carolin; Tierling, Sascha; Schmitt, Ina; Peitz, Michael; Koch, Philipp; Walter, Jörn Erik; Wüllner, Ullrich; Brüstle, Oliver | |
| article | 2018 | Comprehensive Evaluation of Commercial Bisulfite-Based DNA Methylation Kits and Development of an Alternative Protocol With Improved Conversion Performance | Tierling, Sascha; Schmitt, Beate; Walter, Jörn Erik | |
| article | 2018 | Comparison of initial oral microbiomes of young adults with and without cavitated dentin caries lesions using an in situ biofilm model | Rupf, Stefan; Laczny, Cedric C.; Galata, Valentina; Backes, Christina; Keller, Andreas; Umanskaya, Natalia; Erol, Arzu; Tierling, Sascha; Lo Porto, Christina; Walter, Jörn; Kirsch, Jasmin; Hannig, Matthias; Hannig, Christian | |
| conferenceObjectPart | 2017 | A Stochastic Model for the Formation of Spatial Methylation Patterns | Lück, Alexander; Giehr, Peter Pascal; Walter, Jörn Erik; Wolf, Verena | Feret, Jérôme; Koeppl, Heinz |
| article | 2017 | Hairpin Bisulfite Sequencing: Synchronous Methylation Analysis on Complementary DNA Strands of Individual Chromosomes | Giehr, Peter Pascal; Walter, Jörn Erik | |
| article | 2017 | The long non-coding RNA H19 suppresses carcinogenesis and chemoresistance in hepatocellular carcinoma | Schultheiss, Christina S.; Laggai, Stephan; Czepukojc, Beate; Hussein, Usama K.; List, Markus; Barghash, Ahmad; Tierling, Sascha; Hosseini, Kevan; Golob-Schwarzl, Nicole; Pokorny, Juliane; Hachenthal, Nina; Schulz, Marcel; Helms, Volkhard; Walter, Jörn Erik; Zimmer, Vincent; Lammert, Frank; Bohle, Rainer M.; Dandolo, Luisa; Haybaeck, Johannes; Kiemer, Alexandra; Kessler, Sonja M. | |
| article | 2017 | MeDeCom: Discovery and Quantification of Latent Components of Heterogeneous Methylomes | Lutsik, Pavlo; Slawski, Martin; Gasparoni, Gilles; Vedeneev, Nikita; Hein, Matthias; Walter, Jörn Erik | |
| article | 2017 | Blockage of the Epithelial-to-Mesenchymal Transition Is Required for Embryonic Stem Cell Derivation | Totonchi, Mehdi; Hassani, Seyedeh-Nafiseh; Sharifi-Zarchi, Ali; Tapia, Natalia; Adachi, Kenjiro; Arand, Julia; Greber, Boris; Sabour, Davood; Araúzo-Bravo, Marcos J.; Walter, Jörn Erik; Pakzad, Mohammad; Gourabi, Hamid; Schöler, Hans R.; Baharvand, Hossein | |
| article | 2017 | Histone and DNA methylation control by H3 serine 10/threonine 11 phosphorylation in the mouse zygote | Lan, Jie; Lepikhov, Konstantin; Giehr, Peter Pascal; Walter, Jörn Erik | |
| article | 2017 | Combining transcription factor binding affinities with open-chromatin data for accurate gene expression prediction | Schmidt, Florian; Gasparoni, Nina; Gasparoni, Gilles; Gianmoena, Kathrin; Cadenas, Cristina; Polansky, Julia K.; Ebert, Peter; Nordström, Karl; Barann, Matthias; Sinha, Anupam; Fröhler, Sebastian; Xiong, Jieyi; Dehghani Amirabad, Azim; Behjati Ardakani, Fatemeh; Hutter, Barbara; Zipprich, Gideon; Felder, Bärbel; Eils, Jürgen; Brors, Benedikt; Chen, Wei; Hengstler, Jan G.; Hamann, Alf; Lengauer, Thomas; Rosenstiel, Philip; Walter, Jörn Erik; Schulz, Marcel H. | |
| EditedCollection | 2017 | Epigenetik : Implikationen für die Lebens- und Geisteswissenschaften | | Walter, Jörn Erik; Hümpel, Anja |
| article | 2015 | Selective impairment of methylation maintenance is the major cause of DNA methylation reprogramming in the early embryo | Arand, Julia; Wossidlo, Mark; Lepikhov, Konstantin; Peat, Julian R; Reik, Wolf; Walter, Jörn | |
| article | 2013 | FGF signalling inhibition in ESCs drives rapid genome-wide demethylation to the epigenetic ground state of pluripotency | Ficz, Gabriella; Hore, Timothy A.; Santos, Fatima; Lee, Heather J.; Dean, Wendy; Arand, Julia; Krueger, Felix; Oxley, David; Paul, Yu-Lee; Walter, Jörn; Cook, Simon J.; Andrews, Simon; Branco, Miguel R.; Reik, Wolf | |
