Dokumenttyp | Erscheinungsjahr | Titel | Autoren | Herausgeber |
---|
article | 2024 | Genetically Engineered Filamentous Bacteriophages Displaying TGF-β1 Promote Angiogenesis in 3D Microenvironments | Baek, In-Hyuk; Helms, Volkhard; Kim, Youngjun | |
Other | 2024 | Engineering Material Properties of Transcription Factor Condensates to Control Gene Expression in Mammalian Cells and Mice | Fischer, Alexandra A.M.; Robertson, Hanah B.; Kong, Deqiang; Grimm, Merlin M.; Grether, Jakob; Groth, Johanna; Baltes, Carsten; Fliegauf, Manfred; Lautenschläger, Franziska; Grimbacher, Bodo; Ye, Haifeng; Helms, Volkhard; Weber, Winfried | |
article | 2024 | Engineering Material Properties of Transcription Factor Condensates to Control Gene Expression in Mammalian Cells and Mice | Fischer, Alexandra A.M.; Robertson, Hanah B.; Kong, Deqiang; Grimm, Merlin M.; Grether, Jakob; Groth, Johanna; Baltes, Carsten; Fliegauf, Manfred; Lautenschläger, Franziska; Grimbacher, Bodo; Ye, Haifeng; Helms, Volkhard; Weber, Wilfried | |
article | 2023 | The ER Protein Translocation Channel Subunit Sbh1 Controls Virulence of Cryptococcus neoformans | Santiago-Tirado, Felipe H.; Hurtaux, Thomas; Geddes-McAlister, Jennifer; Nguyen, Duy; Helms, Volkhard; Doering, Tamara L.; Römisch, Karin | |
article | 2023 | Identification of molecular candidates which regulate calcium-dependent CD8+ T-cell cytotoxicity | Zöphel, Sylvia; Schäfer, Gertrud; Nazarieh, Maryam; Konetzki, Verena; Hoxha, Cora; Meese, Eckart; Hoth, Markus; Helms, Volkhard; Hamed, Mohamed; Schwarz, Eva C. | |
article | 2023 | Sec61 channel subunit Sbh1/Sec61β promotes ER translocation of proteins with suboptimal targeting sequences and is fine-tuned by phosphorylation | Barbieri, Guido; Simon, Julien; Lupusella, Cristina R.; Pereira, Fabio; Elia, Francesco; Meyer, Hadar; Schuldiner, Maya; Hanes, Steven D.; Nguyen, Duy; Helms, Volkhard; Römisch, Karin | |
article | 2023 | Differential exon usage of developmental genes is associated with deregulated epigenetic marks | Do, Hoang Thu Trang; Shanak, Siba; Barghash, Ahmad; Helms, Volkhard | |
article | 2022 | Optimized Data Set and Feature Construction for Substrate Prediction of Membrane Transporters | Denger, Andreas; Helms, Volkhard | |
article | 2022 | How Peptides Bind to PSD-95/Discs-Large/ZO-1 Domains | Künzel, Nicolas; Helms, Volkhard | |
article | 2022 | How phosphorylation of peptides affects their interaction with 14-3-3η domains | Künzel, Nicolas; Helms, Volkhard | |
Other | 2022 | The ER protein translocation channel subunit Sbh1 controls virulence of Cryptococcus neoformans | Santiago-Tirado, Felipe H.; Hurtaux, Thomas; Geddes-McAlister, Jennifer; Nguyen, Duy; Helms, Volkhard; Doering, Tamara L.; Römisch, Karin | |
article | 2022 | Unspecific CTL Killing Is Enhanced by High Glucose via TNF-Related Apoptosis-Inducing Ligand | Yang, Wenjuan; Denger, Andreas; Diener, Caroline Elisabeth; Küppers, Frederic; Soriano-Baguet, Leticia; Schäfer, Gertrud; Yanamandra, Archana K.; Zhao, Renping; Knörck, Arne; Schwarz, Eva C.; Hart, Martin; Lammert, Frank; Roma, Leticia Prates; Brenner, Dirk; Christidis, Grigorios; Helms, Volkhard; Meese, Eckart; Hoth, Markus; Qu, Bin | |
article | 2022 | PEX19 Coordinates Neutral Lipid Storage in Cells in a Peroxisome-Independent Fashion | Lyschik, Sven; Lauer, Anna A.; Roth, Tanja; Janitschke, Daniel; Hollander, Markus; Will, Thorsten; Hartmann, Tobias; Kopito, Ron R.; Helms, Volkhard; Grimm, Marcus O. W.; Schrul, Bianca | |
article | 2022 | Synthesis, Biological Evaluation and Docking Studies of Ring-Opened Analogues of Ipomoeassin F | O’Keefe, Sarah; Bhadra, Pratiti; Duah, Kwabena B.; Zong, Guanghui; Tenay, Levise; Andrews, Lauren; Schneider, Hayden; Anderson, Ashley; Hu, Zhijian; Aljewari, Hazim S.; Hall, Belinda S.; Simmonds, Rachel E.; Helms, Volkhard; High, Stephen; Shi, Wei Q. | |
article | 2022 | Proteomics Identifies Substrates and a Novel Component in hSnd2-Dependent ER Protein Targeting | Tirincsi, Andrea; O’Keefe, Sarah; Nguyen, Duy; Sicking, Mark; Dudek, Johanna; Förster, Friedrich; Jung, Martin; Hadzibeganovic, Drazena; Helms, Volkhard; High, Stephen; Zimmermann, Richard; Lang, Sven | |
article | 2022 | Is the proteomic composition of the salivary pellicle dependent on the substrate material? | Trautmann, Simone; Künzel, Nicolas; Fecher-Trost, Claudia; Barghash, Ahmad; Dudek, Johanna; Flockerzi, Veit; Helms, Volkhard; Hannig, Matthias | |
article | 2021 | Dysregulation of cholesterol homeostasis in human lung cancer tissue and tumour-associated macrophages | Hoppstädter, Jessica; Dembek, Anna; Höring, Marcus; Schymik, Hanna S.; Dahlem, Charlotte; Sultan, Afnan; Wirth, Natalie; Al-Fityan, Salma; Diesel, Britta; Gasparoni, Gilles; Walter, Jörn; Helms, Volkhard; Huwer, Hanno; Simon, Martin; Liebisch, Gerhard; Schulz, Marcel H.; Kiemer, Alexandra K. | |
article | 2021 | A Methylation-Directed, Synthetic Pap Switch Based on Self-Complementary Regulatory DNA Reconstituted in an All E. coli Cell-Free Expression System | Worst, Emanuel G.; Finkler, Marc; Schenkelberger, Marc; Kurt, Ömer; Helms, Volkhard; Noireaux, Vincent; Ott, Albrecht | |
article | 2021 | A longer isoform of Stim1 is a negative SOCE regulator but increases cAMP-modulated NFAT signaling | Knapp, Mona L.; Alansary, Dalia; Poth, Vanessa; Förderer, Kathrin; Sommer, Frederik; Zimmer, David; Schwarz, Yvonne; Künzel, Nicolas; Kless, Achim; Machaca, Khaled; Helms, Volkhard; Mühlhaus, Timo; Schroda, Michael; Lis, Annette; Niemeyer, Barbara A. | |
article | 2021 | ProPores2: Web Service and Stand-Alone Tool for Identifying, Manipulating, and Visualizing Pores in Protein Structures | Hollander, Markus; Rasp, David; Aziz, Moomal; Helms, Volkhard | |
article | 2021 | Quantitative Proteomics and Differential Protein Abundance Analysis after Depletion of Putative mRNA Receptors in the ER Membrane of Human Cells Identifies Novel Aspects of mRNA Targeting to the ER | Bhadra, Pratiti; Schorr, Stefan; Lerner, Monika; Nguyen, Duy; Dudek, Johanna; Förster, Friedrich; Helms, Volkhard; Lang, Sven; Zimmermann, Richard | |
article | 2021 | Molecular Modeling of Signal Peptide Recognition by Eukaryotic Sec Complexes | Bhadra, Pratiti; Helms, Volkhard | |
Other | 2021 | High glucose enhances antigen-independent CTL killing via TRAIL | Yang, Wenjuan; Denger, Andreas; Diener, Caroline; Küppers, Frederic; Soriano-Baguet, Leticia; Schäfer, Gertrud; Yanamandra, Archana K.; Zhao, Renping; Knörck, Arne; Schwarz, Eva C.; Hart, Martin; Lammert, Frank; Roma, Leticia Prates; Brenner, Dirk; Christidis, Grigorios; Helms, Volkhard; Meese, Eckart; Hoth, Markus; Qu, Bin | |
article | 2021 | Quantitative Proteomics and Differential Protein Abundance Analysis after the Depletion of PEX3 from Human Cells Identifies Additional Aspects of Protein Targeting to the ER | Zimmermann, Richard; Lang, Sven; Lerner, Monika; Förster, Friedrich; Nguyen, Duy; Helms, Volkhard; Schrul, Bianca | |
article | 2021 | How does Sec63 affect the conformation of Sec61 in yeast? | Bhadra, Pratiti; Yadhanapudi, Lalitha; Römisch, Karin; Helms, Volkhard | |
article | 2021 | Identification of Biomarkers Controlling Cell Fate In Blood Cell Development | Nazarieh, Maryam; Hoeppner, Marc; Helms, Volkhard | |
article | 2020 | Identification of signal peptide features for substrate specificity in human Sec62/Sec63-dependent ER protein import | Schorr, Stefan; Nguyen, Duy; Haßdenteufel, Sarah; Nagaraj, Nagarjuna; Cavalié, Adolfo; Greiner, Markus; Weissgerber, Petra; Loi, Marisa; Paton, Adrienne W; Paton, James C; Molinari, Maurizio; Förster, Friedrich; Dudek, Johanna; Lang, Sven; Helms, Volkhard; Zimmermann, Richard | |
article | 2020 | TRAM1 protein may support ER protein import by modulating the phospholipid bilayer near the lateral gate of the Sec61-channel | Klein, Marie-Christine; Lerner, Monika; Nguyen, Duy; Pfeffer, Stefan; Dudek, Johanna; Förster, Friedrich; Helms, Volkhard; Lang, Sven; Zimmermann, Richard | |
article | 2020 | Interorganelle Tethering to Endocytic Organelles Determines Directional Cytokine Transport in CD4+ T Cells | Zhou, Yan; Zhao, Renping; Schwarz, Eva C.; Akbar, Rahmad; Kaba, Mayis; Pattu, Varsha; Helms, Volkhard; Rieger, Heiko; Nunes-Hasler, Paula; Qu, Bin | |
article | 2020 | Deep Proteomic Insights into the Individual Short-Term Pellicle Formation on Enamel-An In Situ Pilot Study | Trautmann, Simone; Künzel, Nicolas; Fecher-Trost, Claudia; Barghash, Ahmad; Schalkowsky, Pascal; Dudek, Johanna; Delius, Judith; Helms, Volkhard; Hannig, Matthias | |
article | 2020 | DNA methylation and the core pluripotency network | Shanak, Siba; Helms, Volkhard | |
article | 2020 | Analysis of the dynamics of Staphylococcus aureus binding to white blood cells using whole blood assay and geno-to-pheno mapping | Gaidar, Daria; Jonas, Alice; Akulenko, Ruslan; Ruffing, Ulla; Herrmann, Mathias; Helms, Volkhard; von Müller, Lutz | |
article | 2019 | Differential analysis of combinatorial protein complexes with CompleXChange | Will, Thorsten; Helms, Volkhard | |
article | 2019 | Redox signals at the ER-mitochondria interface control melanoma progression | Zhang, Xin; Gibhardt, Christine S.; Will, Thorsten; Stanisz, Hedwig; Körbel, Christina; Mitkovski, Miso; Stejerean, Ioana; Cappello, Sabrina; Pacheu-Grau, David; Dudek, Jan; Tahbaz, Nasser; Mina, Lucas; Simmen, Thomas; Laschke, Matthias W.; Menger, Michael D.; Schön, Michael P.; Helms, Volkhard; Niemeyer, Barbara A.; Rehling, Peter; Vultur, Adina; Bogeski, Ivan | |
article | 2019 | Relative Principal Components Analysis: Application to Analyzing Biomolecular Conformational Changes | Ahmad, Mazen; Helms, Volkhard; Kalinina, Olga V.; Lengauer, Thomas | |
article | 2019 | Eeyarestatin Compounds Selectively Enhance Sec61-Mediated Ca2+ Leakage from the Endoplasmic Reticulum | Gamayun, Igor; O'Keefe, Sarah; Pick, Tillman; Klein, Marie-Christine; Nguyen, Duy; McKibbin, Craig; Piacenti, Michela; Williams, Helen M.; Flitsch, Sabine L.; Whitehead, Roger C.; Swanton, Eileithyia; Helms, Volkhard; High, Stephen; Zimmermann, Richard; Cavalié, Adolfo | |
article | 2019 | The mRNA-binding Protein TTP/ZFP36 in Hepatocarcinogenesis and Hepatocellular Carcinoma | Kröhler, Tarek; Kessler, Sonja M.; Hosseini, Kevan; List, Markus; Barghash, Ahmad; Patial, Sonika; Laggai, Stephan; Gemperlein, Katja; Haybaeck, Johannes; Müller, Rolf; Helms, Volkhard; Schulz, Marcel H.; Hoppstädter, Jessica; Blackshear, Perry J.; Kiemer, Alexandra K. | |
article | 2019 | SNP and indel frequencies at transcription start sites and at canonical and alternative translation initiation sites in the human genome | Neininger, Kerstin; Marschall, Tobias; Helms, Volkhard | |
article | 2019 | IGF2 mRNA Binding Protein 2 Transgenic Mice Are More Prone to Develop a Ductular Reaction and to Progress Toward Cirrhosis | Czepukojc, Beate; Abuhaliema, Ali; Barghash, Ahmad; Tierling, Sascha; Naß, Norbert; Simon, Yvette; Körbel, Christina; Cadenas, Cristina; van Hul, Noemi; Sachinidis, Agapios; Hengstler, Jan G; Helms, Volkhard; Laschke, Matthias W.; Walter, Jörn; Haybaeck, Johannes; Leclercq, Isabelle; Kiemer, Alexandra; Kessler, Sonja M. | |
article | 2019 | Topology Consistency of Disease-specific Differential Co-regulatory Networks | Nazarieh, Maryam; Rajula, Hema Sekhar Reddy; Helms, Volkhard | |
article | 2019 | ER import of small human presecretory proteins: components and mechanisms | Haßdenteufel, Sarah; Nguyen, Duy; Helms, Volkhard; Lang, Sven; Zimmermann, Richard | |
article | 2018 | AXER is an ATP/ADP exchanger in the membrane of the endoplasmic reticulum | Klein, Marie-Christine; Zimmermann, Katharina; Schorr, Stefan; Landini, Martina; Klemens, Patrick A. W.; Altensell, Jacqueline; Jung, Martin; Krause, Elmar; Nguyen, Duy; Helms, Volkhard; Rettig, Jens; Fecher-Trost, Claudia; Cavalié, Adolfo; Hoth, Markus; Bogeski, Ivan; Neuhaus, H Ekkehard; Zimmermann, Richard; Lang, Sven; Haferkamp, Ilka | |
article | 2018 | Adding phosphorylation events to the core oscillator driving the cell cycle of fission yeast | Humaidan, Dania; Breinig, Frank; Helms, Volkhard | |
article | 2018 | Copy Number Alterations in Tumor Genomes Deleting Antineoplastic Drug Targets Partially Compensated by Complementary Amplifications | Tran, Ha Vu; Kiemer, Alexandra; Helms, Volkhard | |
article | 2018 | Identification of novel diabetes impaired miRNA-transcription factor co-regulatory networks in bone marrow-derived Lin-/VEGF-R2+ endothelial progenitor cells | Irhimeh, Mohammad R.; Hamed, Mohamed; Barthelmes, Daniel; Gladbach, Yvonne; Helms, Volkhard; Shen, Weiyong; Gillies, Mark C. | |
article | 2018 | Proteomic Analysis of the Initial Oral Pellicle in Caries-Active and Caries-Free Individuals | Trautmann, Simone; Barghash, Ahmad; Fecher-Trost, Claudia; Schalkowsky, Pascal; Hannig, Christian; Kirsch, Jasmin; Rupf, Stefan; Keller, Andreas; Helms, Volkhard; Hannig, Matthias | |
article | 2018 | Proteomics reveals signal peptide features determining the client specificity in human TRAP-dependent ER protein import | Nguyen, Duy; Stutz, Regine; Schorr, Stefan; Lang, Sven; Pfeffer, Stefan; Freeze, Hudson H.; Förster, Friedrich; Helms, Volkhard; Dudek, Johanna; Zimmermann, Richard | |
article | 2018 | Prediction of Synergistic Toxicity of Binary Mixtures to Vibrio fischeri Based on Biomolecular Interaction Networks | Kim, Jongwoon; Fischer, Max; Helms, Volkhard | |
article | 2018 | ALLO: A tool to discriminate and prioritize allosteric pockets | Akbar, Rahmad; Helms, Volkhard | |
article | 2018 | MutaNET: a tool for automated analysis of genomic mutations in gene regulatory networks | Hollander, Markus; Hamed, Mohamed; Helms, Volkhard; Neininger, Kerstin | |
article | 2017 | An Update on Sec61 Channel Functions, Mechanisms, and Related Diseases | Lang, Sven; Pfeffer, Stefan; Lee, Po-Hsien; Cavalié, Adolfo; Helms, Volkhard; Förster, Friedrich; Zimmermann, Richard | |
article | 2017 | Randomization Strategies Affect Motif Significance Analysis in TF-miRNA-Gene Regulatory Networks | Sadegh, Sepideh; Nazarieh, Maryam; Spaniol, Christian; Helms, Volkhard | |
article | 2017 | The long non-coding RNA H19 suppresses carcinogenesis and chemoresistance in hepatocellular carcinoma | Schultheiss, Christina S.; Laggai, Stephan; Czepukojc, Beate; Hussein, Usama K.; List, Markus; Barghash, Ahmad; Tierling, Sascha; Hosseini, Kevan; Golob-Schwarzl, Nicole; Pokorny, Juliane; Hachenthal, Nina; Schulz, Marcel; Helms, Volkhard; Walter, Jörn Erik; Zimmer, Vincent; Lammert, Frank; Bohle, Rainer M.; Dandolo, Luisa; Haybaeck, Johannes; Kiemer, Alexandra; Kessler, Sonja M. | |
article | 2017 | Human profilin 1 is a negative regulator of CTL mediated cell-killing and migration | Schoppmeyer, Rouven; Zhao, Renping; Cheng, He; Hamed, Mohamed; Liu, Chen; Zhou, Xiao; Schwarz, Eva C.; Zhou, Yan; Knörck, Arne; Schwär, Gertrud; Ji, Shunrong; Liu, Liang; Long, Jiang; Helms, Volkhard; Hoth, Markus; Yu, Xianjun; Qu, Bin | |
article | 2017 | Methylation-targeted specificity of the DNA binding proteins R.DpnI and MeCP2 studied by molecular dynamics simulations | Shanak, Siba; Ulucan, Ozlem; Helms, Volkhard | |
article | 2017 | Rewiring of the inferred protein interactome during blood development studied with the tool PPICompare | Will, Thorsten; Helms, Volkhard | |
article | 2017 | Bystander cells enhance NK cytotoxic efficiency by reducing search time | Zhou, Xiao; Zhao, Renping; Schwarz, Karsten; Mangeat, Matthieu; Schwarz, Eva C.; Hamed, Mohamed; Bogeski, Ivan; Helms, Volkhard; Rieger, Heiko; Qu, Bin | |
article | 2017 | Community-Associated Staphylococcus aureus from Sub-Saharan Africa and Germany: A Cross-Sectional Geographic Correlation Study | Ruffing, Ulla; Alabi, Abraham; Kazimoto, Theckla; Vubil, Delfino C.; Akulenko, Ruslan; Abdulla, Salim; Alonso, Pedro; Bischoff, Markus; Germann, Anja; Grobusch, Martin P.; Helms, Volkhard; Hoffmann, Jonas; Kern, Winfried V.; Kremsner, Peter G.; Mandomando, Inacio; Mellmann, Alexander; Peters, Georg; Schaumburg, Frieder; Schubert, Sabine; Strauß, Lena; Tanner, Marcel; Briesen, Hagen von; Wende, Laura; Müller, Lutz von; Herrmann, Mathias | |
article | 2017 | Expression regulation by a methyl-CpG binding domain in an E. coli based, cell-free TX-TL system | Schenkelberger, Marc; Shanak, Siba; Finkler, Mark R.; Worst, Emanuel G.; Noireaux, Vincent; Helms, Volkhard; Ott, Alina | |
article | 2017 | Elucidating the energetic contributions to the binding free energy | Ahmad, Mazen; Helms, Volkhard; Kalinina, Olga V.; Lengauer, Thomas | |
article | 2017 | Linking Hematopoietic Differentiation to Co-Expressed Sets of Pluripotency-Associated and Imprinted Genes and to Regulatory microRNA-Transcription Factor Motifs | Hamed, Mohamed; Trumm, Johannes; Spaniol, Christian; Sethi, Riccha; Irhimeh, Mohammad R.; Fuellen, Georg; Paulsen, Martina; Helms, Volkhard | |