Dokumenttyp | Erscheinungsjahr | Titel | Autoren | Herausgeber |
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article | 2024 | Elucidation of unusual biosynthesis and DnaN-targeting mode of action of potent anti-tuberculosis antibiotics Mycoplanecins | Fu, Chengzhang; Liu, Yunkun; Walt, Christine; Rasheed, Sari; Bader, Chantal D.; Lukat, Peer; Neuber, Markus; Haeckl, F. P. Jake; Blankenfeldt, Wulf; Kalinina, Olga V.; Müller, Rolf | |
article | 2023 | Simulated Tempering-Enhanced Umbrella Sampling Improves Convergence of Free Energy Calculations of Drug Membrane Permeation | Sousa, Carla F.; Becker, Robert A.; Lehr, Claus-Michael; Kalinina, Olga V.; Hub, Jochen S. | |
article | 2023 | Machine learning and phylogenetic analysis allow for predicting antibiotic resistance in M. tuberculosis | Yurtseven, Alper; Buyanova, Sofia; Agrawal, Amay Ajaykumar; Bochkareva, Olga O.; Kalinina, Olga V. | |
article | 2023 | GlyLES: Grammar-based Parsing of Glycans from IUPAC-condensed to SMILES | Joeres, Roman; Bojar, Daniel; Kalinina, Olga | |
article | 2023 | Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis | Adam, Sebastian; Zheng, Dazhong; Klein, Andreas; Volz, Carsten; Mullen, William; Shirran, Sally L.; Smith, Brian O.; Kalinina, Olga V.; Müller, Rolf; Koehnke, Jesko | |
article | 2023 | MetaProFi: an ultrafast chunked Bloom filter for storing and querying protein and nucleotide sequence data for accurate identification of functionally relevant genetic variants | Srikakulam, Sanjay K.; Keller, Sebastian; Dabbaghie, Fawaz; Bals, Robert; Kalinina, Olga V. | |
article | 2023 | PanPA: generation and alignment of panproteome graphs | Dabbaghie, Fawaz; Srikakulam, Sanjay K.; Marschall, Tobias; Kalinina, Olga V. | |
article | 2022 | d-StructMAn: Containerized structural annotation on the scale from genetic variants to whole proteomes | Gress, Alexander; Srikakulam, Sanjay K.; Keller, Sebastian; Ramensky, Vasily; Kalinina, Olga V. | |
article | 2020 | A shift of dynamic equilibrium between the KIT active and inactive states causes drug resistance | Srikakulam, Sanjay K.; Bastys, Tomas; Kalinina, Olga | |
article | 2020 | DIGGER: exploring the functional role of alternative splicing in protein interactions | Louadi, Zakaria; Yuan, Kevin; Gress, Alexander; Tsoy, Olga; Kalinina, Olga V.; Baumbach, Jan; Kacprowski, Tim; List, Markus | |
article | 2020 | Non-active site mutants of HIV-1 protease influence resistance and sensitisation towards protease inhibitors | Bastys, Tomas; Gapsys, Vytautas; Walter, Hauke; Heger, Eva; Doncheva, Nadezhda T.; Kaiser, Rolf; de Groot, Bert L.; Kalinina, Olga V. | |
article | 2020 | SphereCon-a method for precise estimation of residue relative solvent accessible area from limited structural information | Gress, Alexander; Kalinina, Olga V. | |
article | 2019 | Relative Principal Components Analysis: Application to Analyzing Biomolecular Conformational Changes | Ahmad, Mazen; Helms, Volkhard; Kalinina, Olga V.; Lengauer, Thomas | |