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Results 1-10 of 13 (Search time: 0.003 seconds).
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Year of PublicationTitleAuthor(s)Open Access
2019Multi-platform discovery of haplotype-resolved structural variation in human genomesChaisson, Mark J P; Sanders, Ashley D; Zhao, Xuefang; Malhotra, Ankit; Porubsky, David; Rausch, Tobias; Gardner, Eugene J; Rodriguez, Oscar L; Guo, Li; Collins, Ryan L; Fan, Xian; Wen, Jia; Handsaker, Robert E; Fairley, Susan; Kronenberg, Zev N; Kong, Xiangmeng; Hormozdiari, Fereydoun; Lee, Dillon; Wenger, Aaron M; Hastie, Alex R; Antaki, Danny; Anantharaman, Thomas; Audano, Peter A; Brand, Harrison; Cantsilieris, Stuart; Cao, Han; Cerveira, Eliza; Chen, Chong; Chen, Xintong; Chin, Chen-Shan; Chong, Zechen; Chuang, Nelson T; Lambert, Christine C; Church, Deanna M; Clarke, Laura; Farrell, Andrew; Flores, Joey; Galeev, Timur; Gorkin, David U; Gujral, Madhusudan; Guryev, Victor; Heaton, William Haynes; Korlach, Jonas; Kumar, Sushant; Kwon, Jee Young; Lam, Ernest T; Lee, Jong Eun; Lee, Joyce; Lee, Wan-Ping; Lee, Sau Peng; Li, Shantao; Marks, Patrick; Viaud-Martinez, Karine; Meiers, Sascha; Munson, Katherine M; Navarro, Fabio C P; Nelson, Bradley J; Nodzak, Conor; Noor, Amina; Kyriazopoulou-Panagiotopoulou, Sofia; Pang, Andy W C; Qiu, Yunjiang; Rosanio, Gabriel; Ryan, Mallory; Stütz, Adrian; Spierings, Diana C J; Ward, Alistair; Welch, AnneMarie E; Xiao, Ming; Xu, Wei; Zhang, Chengsheng; Zhu, Qihui; Zheng-Bradley, Xiangqun; Lowy, Ernesto; Yakneen, Sergei; McCarroll, Steven; Jun, Goo; Ding, Li; Koh, Chong Lek; Ren, Bing; Flicek, Paul; Chen, Ken; Gerstein, Mark B; Kwok, Pui-Yan; Lansdorp, Peter M; Marth, Gabor T; Sebat, Jonathan; Shi, Xinghua; Bashir, Ali; Ye, Kai; Devine, Scott E; Talkowski, Michael E; Mills, Ryan E; Marschall, Tobias; Korbel, Jan O; Eichler, Evan E; Lee, Charles
2018A graph-based approach to diploid genome assemblyGarg, Shilpa; Rautiainen, Mikko; Novak, Adam M; Garrison, Erik; Durbin, Richard; Marschall, Tobias
2017Mapping and phasing of structural variation in patient genomes using nanopore sequencingCretu Stancu, Mircea; van Roosmalen, Markus J; Renkens, Ivo; Nieboer, Marleen M; Middelkamp, Sjors; de Ligt, Joep; Pregno, Giulia; Giachino, Daniela; Mandrile, Giorgia; Espejo Valle-Inclan, Jose; Korzelius, Jerome; de Bruijn, Ewart; Cuppen, Edwin; Talkowski, Michael E; Marschall, Tobias; de Ridder, Jeroen; Kloosterman, Wigard P
2019Haplotype-aware diplotyping from noisy long readsEbler, Jana; Haukness, Marina; Pesout, Trevor; Marschall, Tobias; Paten, Benedict
2017A Guided Tour to Computational HaplotypingKlau, Gunnar W.; Marschall, Tobias
2018Computational pan-genomics: status, promises and challengesMarschall, Tobias; Marz, M.; Abeel, T.; Dijkstra, L.; Dutilh, B. E.; Ghaffaari, P.; Kersey, P.; Kloosterman, W. P.; Mäkinen, V.; Novak, A. M.; Paten, B.; Porubsky, D.; Rivals, E.; Alkan, C.; Baaijens, J.; de Bakker, P. I. W.; Boeva, V.; Bonnal, R. J. P.; Chiaromonte, F.; Chikhi, R.; Ciccarelli, F. D.; Cijvat, R.; Datema, E.; Duijn, C. M. V.; Eichler, E. E.; Ernst, C.; Eskin, E.; Garrison, E.; El-Kebir, M.; Klau, G. W.; Korbel, J. O.; Lameijer, E.; Langmead, B.; Martin, M.; Medvedev, P.; Mu, J. C.; Neerincx, P.; Ouwens, K.; Peterlongo, P.; Pisanti, N.; Rahmann, S.; Raphael, B.; Reinert, K.; de Ridder, D.; de Ridder, J.; Schlesner, M.; Schulz-Trieglaff, O.; Sanders, A.; Sheikhizadeh, S.; Shneider, C.; Smit, S.; Valenzuela, V.; Wang, J.; Wessels, L.; Zhang, Y.; Guryev, V.; Vandin, F.; Ye, K.; Schönhuth, A.
2019Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genomeWenger, Aaron M; Peluso, Paul; Rowell, William J; Chang, Pi-Chuan; Hall, Richard J; Concepcion, Gregory T; Ebler, Jana; Fungtammasan, Arkarachai; Kolesnikov, Alexey; Olson, Nathan D; Töpfer, Armin; Alonge, Michael; Mahmoud, Medhat; Qian, Yufeng; Chin, Chen-Shan; Phillippy, Adam M; Schatz, Michael C; Myers, Gene; DePristo, Mark A; Ruan, Jue; Marschall, Tobias; Sedlazeck, Fritz J; Zook, Justin M; Li, Heng; Koren, Sergey; Carroll, Andrew; Rank, David R; Hunkapiller, Michael W
2018Strand-seq enables reliable separation of long reads by chromosome via expectation maximizationGhareghani, Maryam; Porubskỳ, David; Sanders, Ashley D; Meiers, Sascha; Eichler, Evan E; Korbel, Jan O; Marschall, Tobias
2017Dense and accurate whole-chromosome haplotyping of individual genomesPorubsky, David; Garg, Shilpa; Sanders, Ashley D; Korbel, Jan O; Guryev, Victor; Lansdorp, Peter M; Marschall, Tobias
2019Genotyping inversions and tandem duplicationsEbler, Jana; Schönhuth, Alexander; Marschall, Tobias