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Results 1-10 of 11 (Search time: 0.005 seconds).
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Year of PublicationTitleAuthor(s)Open Access
2019Haplotype-aware diplotyping from noisy long readsEbler, Jana; Haukness, Marina; Pesout, Trevor; Marschall, Tobias; Paten, Benedict
2018A graph-based approach to diploid genome assemblyGarg, Shilpa; Rautiainen, Mikko; Novak, Adam M.; Garrison, Erik; Durbin, Richard; Marschall, Tobias
2019Bit-parallel sequence-to-graph alignmentRautiainen, Mikko; Mäkinen, Veli; Marschall, Tobias
2018Computational pan-genomics: status, promises and challengesMarschall, Tobias; Marz, M.; Abeel, T.; Dijkstra, L.; Dutilh, B. E.; Ghaffaari, P.; Kersey, P.; Kloosterman, W. P.; Mäkinen, V.; Novak, A. M.; Paten, B.; Porubsky, D.; Rivals, E.; Alkan, C.; Baaijens, J.; de Bakker, P. I. W.; Boeva, V.; Bonnal, R. J. P.; Chiaromonte, F.; Chikhi, R.; Ciccarelli, F. D.; Cijvat, R.; Datema, E.; Duijn, C. M. V.; Eichler, E. E.; Ernst, C.; Eskin, E.; Garrison, E.; El-Kebir, M.; Klau, G. W.; Korbel, J. O.; Lameijer, E.; Langmead, B.; Martin, M.; Medvedev, P.; Mu, J. C.; Neerincx, P.; Ouwens, K.; Peterlongo, P.; Pisanti, N.; Rahmann, S.; Raphael, B.; Reinert, K.; de Ridder, D.; de Ridder, J.; Schlesner, M.; Schulz-Trieglaff, O.; Sanders, A.; Sheikhizadeh, S.; Shneider, C.; Smit, S.; Valenzuela, V.; Wang, J.; Wessels, L.; Zhang, Y.; Guryev, V.; Vandin, F.; Ye, K.; Schönhuth, A.
2017Dense and accurate whole-chromosome haplotyping of individual genomesPorubsky, David; Garg, Shilpa; Sanders, Ashley D.; Korbel, Jan O.; Guryev, Victor; Lansdorp, Peter M.; Marschall, Tobias
2019Fully-sensitive seed finding in sequence graphs using a hybrid indexGhaffaari, Ali; Marschall, Tobias
2019Genotyping inversions and tandem duplicationsEbler, Jana; Schönhuth, Alexander; Marschall, Tobias
2018Strand-seq enables reliable separation of long reads by chromosome via expectation maximizationGhareghani, Maryam; Porubskỳ, David; Sanders, Ashley D.; Meiers, Sascha; Eichler, Evan E.; Korbel, Jan O.; Marschall, Tobias
2017Mapping and phasing of structural variation in patient genomes using nanopore sequencingCretu Stancu, Mircea; van Roosmalen, Markus J.; Renkens, Ivo; Nieboer, Marleen M.; Middelkamp, Sjors; de Ligt, Joep; Pregno, Giulia; Giachino, Daniela; Mandrile, Giorgia; Espejo Valle-Inclan, Jose; Korzelius, Jerome; de Bruijn, Ewart; Cuppen, Edwin; Talkowski, Michael E.; Marschall, Tobias; de Ridder, Jeroen; Kloosterman, Wigard P.
2019Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genomeWenger, Aaron M.; Peluso, Paul; Rowell, William J.; Chang, Pi-Chuan; Hall, Richard J.; Concepcion, Gregory T.; Ebler, Jana; Fungtammasan, Arkarachai; Kolesnikov, Alexey; Olson, Nathan D.; Töpfer, Armin; Alonge, Michael; Mahmoud, Medhat; Qian, Yufeng; Chin, Chen-Shan; Phillippy, Adam M.; Schatz, Michael C.; Myers, Gene; DePristo, Mark A.; Ruan, Jue; Marschall, Tobias; Sedlazeck, Fritz J.; Zook, Justin M.; Li, Heng; Koren, Sergey; Carroll, Andrew; Rank, David R.; Hunkapiller, Michael W.